CAS OpenIR  > 中科院上海应用物理研究所2011-2019年
Semi-supervised Protein Function Prediction via Sequential Linear Neighborhood Propagation
Wang, JY(王靖琰); Li, YP(李勇平); Zhang, Y; He, JH(何建华)
2012
Conference Name7th International Conference on Intelligent Computing (ICIC)
Source PublicationBIO-INSPIRED COMPUTING AND APPLICATIONS
Conference DateAUG 11-14, 2011
Conference PlaceZhengzhou, PEOPLES R CHINA
AbstractPredicting protein function is one of the most challenging problems of the post-genomic era. The development of experimental methods for genome scale analysis of molecular interaction networks has provided new approaches to inferring protein function. In this paper we introduce a new graph-based semi-supervised classification algorithm Sequential Linear Neighborhood Propagation (SLNP), which addresses the problem of the classification of partially labeled protein interaction networks. The proposed SLNP firstly constructs a sequence of node sets according to their shortest distance to the labeled nodes, and then predicts the function of the unlabel proteins from the set closer to labeled one, using Linear Neighborhood Propagation. Its performance is assessed on the Saccharomyces cerevisiae PPI network data sets with good results compared with three current state-of-the-art algorithms.
ISSN0302-9743
ISBN978-3-642-24552-7
Indexed BySCI
Funding Project应物所课题组
Language英语
Document Type会议论文
Identifierhttp://ir.sinap.ac.cn/handle/331007/13424
Collection中科院上海应用物理研究所2011-2019年
Recommended Citation
GB/T 7714
Wang, JY,Li, YP,Zhang, Y,et al. Semi-supervised Protein Function Prediction via Sequential Linear Neighborhood Propagation[C],2012.
Files in This Item: Download All
File Name/Size DocType Version Access License
Semi-supervised Prot(177KB) 开放获取CC BY-NC-SAView Download
Related Services
Recommend this item
Bookmark
Usage statistics
Export to Endnote
Google Scholar
Similar articles in Google Scholar
[Wang, JY(王靖琰)]'s Articles
[Li, YP(李勇平)]'s Articles
[Zhang, Y]'s Articles
Baidu academic
Similar articles in Baidu academic
[Wang, JY(王靖琰)]'s Articles
[Li, YP(李勇平)]'s Articles
[Zhang, Y]'s Articles
Bing Scholar
Similar articles in Bing Scholar
[Wang, JY(王靖琰)]'s Articles
[Li, YP(李勇平)]'s Articles
[Zhang, Y]'s Articles
Terms of Use
No data!
Social Bookmark/Share
File name: Semi-supervised Protein Function Prediction via Sequential Linear Neighborhood Propagation.pdf
Format: Adobe PDF
All comments (0)
No comment.
 

Items in the repository are protected by copyright, with all rights reserved, unless otherwise indicated.